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Print mizer objects

Source: R/generic_methods.R
print.Rd

Mizer supplies print() methods for the array-like objects returned by many rate and summary functions. These methods print a compact, readable overview instead of the full matrix or array. The printed output reports the value name, dimensions, units if known, and per-species minimum, mean and maximum values.

Usage

# S3 method for class 'ArraySpeciesBySize'
print(x, ...)
# S3 method for class 'ArrayTimeBySpecies'
print(x, ...)
# S3 method for class 'ArrayTimeBySpeciesBySize'
print(x, ...)
# S3 method for class 'summary.ArraySpeciesBySize'
print(x, ...)
# S3 method for class 'summary.ArrayTimeBySpecies'
print(x, ...)
# S3 method for class 'summary.ArrayTimeBySpeciesBySize'
print(x, ...)

Arguments

x

The object to print.

...

Further arguments. They are currently ignored by the mizer methods.

Value

The printed object, invisibly.

Details

For full numeric access, use the object itself as an ordinary matrix or array or convert it to a long data frame with as.data.frame().

See also

summary(), as.data.frame(), plot(), ArraySpeciesBySize(), ArrayTimeBySpecies(), ArrayTimeBySpeciesBySize()

Examples

# \donttest{
enc <- getEncounter(NS_params)
print(enc)
#> Encounter rate (12 species x 100 sizes) [g/year] 
#>   Sprat: min=0.299 mean=2930 max=39600
#>   Sandeel: min=0.453 mean=3770 max=45500
#>   N.pout: min=0.502 mean=16800 max=148000
#>   Herring: min=0.575 mean=6240 max=80400
#>   Dab: min=0.492 mean=24000 max=267000
#>   Whiting: min=0.436 mean=17300 max=138000
#>   Sole: min=0.365 mean=12100 max=149000
#>   Gurnard: min=0.312 mean=11300 max=135000
#>   Plaice: min=0.232 mean=11800 max=113000
#>   Haddock: min=0.596 mean=24900 max=335000
#>   Cod: min=0.966 mean=52600 max=437000
#>   Saithe: min=0.771 mean=16400 max=188000

biomass <- getBiomass(NS_sim)
print(biomass)
#> Biomass (44 times x 12 species) [g] 
#>   Sprat: min=1.88e+10 mean=3.97e+10 max=5.65e+10
#>   Sandeel: min=7.34e+11 mean=2.1e+12 max=3.74e+12
#>   N.pout: min=2.53e+11 mean=3.25e+11 max=3.93e+11
#>   Herring: min=2.15e+11 mean=3.94e+11 max=5.24e+11
#>   Dab: min=1.2e+10 mean=1.65e+10 max=1.95e+10
#>   Whiting: min=1.98e+11 mean=2.21e+11 max=2.61e+11
#>   Sole: min=9.37e+10 mean=1.06e+11 max=1.28e+11
#>   Gurnard: min=1.07e+11 mean=1.29e+11 max=1.46e+11
#>   Plaice: min=1.95e+12 mean=2.26e+12 max=2.76e+12
#>   Haddock: min=5.36e+11 mean=6.42e+11 max=8.21e+11
#>   Cod: min=2.54e+11 mean=3.87e+11 max=1.62e+12
#>   Saithe: min=6.21e+11 mean=8e+11 max=1.06e+12
# }