Function that takes as input a vector of Rmax values and empirical data of catch or SSB It runs a mizer simulation with the Rmax values,calculate the difference of predicted and observed yield (or biomass) and return the sum of squared errors of the difference.
getError(vary, params, dat, data_type = "catch", tol = 0.1, timetorun = 10)
| vary | Rmax vector, needs to be the same lenght as the number of species in params |
|---|---|
| params | mizerParams object containing the species parameters |
| dat | empirical data of catch or SSB |
| data_type | type of the data given in |
| tol | Default is 0.1 |
| timetorun | lenght of simulation. Default is 10 |