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Set metabolism temperature scaling parameters

Source: R/scale_temp_effect.R
setMetabTher.Rd

Compute the minimum and range of the Arrhenius-style metabolism response over each species' thermal range. These values are later used to scale metabolic effects between 0 and 1.

Usage

setMetabTher(params)

Arguments

params

A MizerParams object that has been prepared for therMizer, typically with upgradeTherParams().

Value

The modified params object with species_params(params)$metab_min and species_params(params)$metab_range filled in.

Examples

params <- suppressMessages(
  mizer::newMultispeciesParams(
    data.frame(species = c("sp1", "sp2"), w_inf = c(100, 1000),
               k_vb = c(0.3, 0.2), w_mat = c(10, 100),
               beta = c(100, 100), sigma = c(2, 2)),
    no_w = 16))
species_params(params)$temp_min <- c(-2, 5)
species_params(params)$temp_max <- c(12, 18)
params <- setMetabTher(params)
species_params(params)$metab_min
#>       sp1       sp2 
#> 0.1739570 0.3430521 
species_params(params)$metab_range
#>       sp1       sp2 
#> 0.4803643 0.7672018